Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | DI534_05575 | Not Available | Positive | 1166219 - 1166863 | 22845.5 |
| arsenic transporter | DI534_05580 | Not Available | Negative | 1166916 - 1168079 | 40198.6 |
| gnat family n-acetyltransferase | DI534_05585 | Not Available | Positive | 1168114 - 1168581 | 16767.1 |
| hypothetical protein | DI534_05590 | Not Available | Positive | 1168732 - 1169124 | 14535.0 |
| large conductance mechanosensitive channel protein mscl | DI534_05600 | Not Available | Negative | 1173303 - 1173704 | 14097.6 |
| 5-formyltetrahydrofolate cyclo-ligase | DI534_05605 | Not Available | Negative | 1173743 - 1174330 | 21468.4 |
| utp--glucose-1-phosphate uridylyltransferase | DI534_05610 | Not Available | Positive | 1174391 - 1175326 | 33873.6 |
| gnat family n-acetyltransferase | DI534_05615 | Not Available | Positive | 1175388 - 1176032 | 23868.5 |
| hypothetical protein | DI534_05620 | Not Available | Positive | 1176232 - 1177215 | 35004.7 |
| Trna-ala | Not Available | Not Available | Positive | 1177272 - 1177347 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
