Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase | DI534_00510 | Not Available | Negative | 110162 - 111421 | 44108.9 |
| ribonuclease d | DI534_00515 | Not Available | Negative | 111487 - 112956 | 53406.4 |
| alpha/beta hydrolase | DI534_00520 | Not Available | Positive | 113374 - 114564 | 43701.5 |
| pyrimidine reductase | DI534_00525 | Not Available | Negative | 114540 - 115259 | 24536.5 |
| cysteine desulfuration protein sufe | DI534_00530 | Not Available | Negative | 115256 - 115693 | 15921.2 |
| sulfurtransferase | DI534_00535 | Not Available | Negative | 115724 - 116638 | 33443.8 |
| cell division protein zape | DI534_00540 | Not Available | Positive | 116775 - 117785 | 36090.1 |
| sodium:proton antiporter | DI534_00545 | Not Available | Negative | 117766 - 118917 | 39457.4 |
| ammonia channel protein | DI534_00550 | Not Available | Positive | 119129 - 120364 | 42059.4 |
| hypothetical protein | DI534_00555 | Not Available | Positive | 120462 - 121475 | 34557.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
