Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug abc transporter atp-binding protein | DI534_05475 | Not Available | Negative | 1149258 - 1150169 | 31452.9 |
| helicase | DI534_05480 | Not Available | Negative | 1150289 - 1151926 | 60259.5 |
| hypothetical protein | DI534_05485 | Not Available | Negative | 1152106 - 1153983 | 65741.2 |
| multidrug abc transporter atpase | DI534_05490 | Not Available | Negative | 1153973 - 1154236 | 9092.58 |
| cold-shock protein | DI534_05495 | Not Available | Positive | 1154292 - 1154672 | 13418.1 |
| duf3027 domain-containing protein | DI534_05500 | Not Available | Positive | 1154680 - 1155333 | 23129.6 |
| duf2530 domain-containing protein | DI534_05505 | Not Available | Negative | 1155205 - 1155447 | 9179.42 |
| phosphoserine transaminase | DI534_05510 | Not Available | Negative | 1155533 - 1156642 | 39514.5 |
| dihydrofolate reductase | DI534_05515 | Not Available | Positive | 1156699 - 1157391 | 25400.4 |
| hnh endonuclease | DI534_05520 | Not Available | Positive | 1157736 - 1158233 | 18335.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
