Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_05370 | Not Available | Negative | 1130039 - 1130524 | 17328.3 |
| duf4032 domain-containing protein | DI534_05375 | Not Available | Negative | 1130524 - 1131810 | 48194.5 |
| hypothetical protein | DI534_05380 | Not Available | Positive | 1131940 - 1133565 | 58831.0 |
| sugar abc transporter atp-binding protein | DI534_05385 | Not Available | Negative | 1133955 - 1135064 | 39635.6 |
| hypothetical protein | DI534_05390 | Not Available | Positive | 1135314 - 1136234 | 32615.6 |
| Trna-thr | Not Available | Not Available | Positive | 1136281 - 1136357 | Not Available |
| nitroreductase | DI534_05400 | Not Available | Negative | 1136378 - 1136902 | 18808.6 |
| peptide-methionine (r)-s-oxide reductase | DI534_05405 | Not Available | Negative | 1136935 - 1137357 | 15445.8 |
| duf2332 domain-containing protein | DI534_05410 | Not Available | Positive | 1137464 - 1138444 | 34276.1 |
| duf3263 domain-containing protein | DI534_05415 | Not Available | Positive | 1138578 - 1138892 | 11520.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
