Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna degradosome polyphosphate kinase | DI534_05270 | Not Available | Negative | 1109422 - 1111599 | 81609.3 |
| glnr family transcriptional regulator | DI534_05275 | Not Available | Negative | 1111724 - 1112491 | 27563.1 |
| hypothetical protein | DI534_05280 | Not Available | Positive | 1112543 - 1112812 | 9262.08 |
| fabp family protein | DI534_05285 | Not Available | Positive | 1112947 - 1113576 | 22700.8 |
| folate-binding protein ygfz | DI534_05290 | Not Available | Positive | 1113573 - 1114655 | 37762.9 |
| fusc family protein | DI534_05295 | Not Available | Positive | 1114681 - 1115784 | 38472.5 |
| sam-dependent methyltransferase | DI534_05300 | Not Available | Negative | 1115849 - 1116652 | 28941.0 |
| phosphoglyceromutase | DI534_05305 | Not Available | Positive | 1116760 - 1117506 | 27465.4 |
| hypothetical protein | DI534_05310 | Not Available | Positive | 1117582 - 1118091 | 18005.4 |
| hypothetical protein | DI534_05315 | Not Available | Positive | 1118094 - 1118405 | 10782.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
