Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rubrerythrin family protein | DI534_05160 | Not Available | Positive | 1093175 - 1094365 | 42137.2 |
| putative protein n(5)-glutamine methyltransferase | DI534_05165 | Not Available | Negative | 1094362 - 1095123 | 26646.9 |
| hypothetical protein | DI534_05170 | Not Available | Positive | 1095237 - 1095560 | 11232.9 |
| hypothetical protein | DI534_05175 | Not Available | Negative | 1095588 - 1095821 | 8185.36 |
| ribonuclease hi | DI534_05180 | Not Available | Positive | 1095809 - 1096414 | 22021.7 |
| hypothetical protein | DI534_05185 | Not Available | Negative | 1096427 - 1096906 | 17711.5 |
| hypothetical protein | DI534_05190 | Not Available | Positive | 1097319 - 1098353 | 38564.5 |
| hypothetical protein | DI534_05200 | Not Available | Positive | 1099169 - 1099573 | 15199.2 |
| hypothetical protein | DI534_05205 | Not Available | Negative | 1099794 - 1100480 | 25267.8 |
| vapc toxin family pin domain ribonuclease | DI534_05210 | Not Available | Negative | 1100506 - 1100868 | 12961.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
