Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DI534_05110 | Not Available | Positive | 1082656 - 1083843 | 41392.9 |
| serine hydroxymethyltransferase | DI534_05115 | Not Available | Positive | 1083999 - 1085291 | 45921.6 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | DI534_05120 | Not Available | Positive | 1085350 - 1086234 | 30334.7 |
| asnc family transcriptional regulator | DI534_05125 | Not Available | Negative | 1086261 - 1086770 | 18208.6 |
| alanine dehydrogenase | DI534_05130 | Not Available | Positive | 1086903 - 1087988 | 36844.5 |
| galactokinase | DI534_05135 | Not Available | Negative | 1087998 - 1089164 | 41203.7 |
| galactose-1-phosphate uridylyltransferase | DI534_05140 | Not Available | Negative | 1089161 - 1090246 | 39784.2 |
| deor/glpr transcriptional regulator | DI534_05145 | Not Available | Positive | 1090272 - 1091162 | 30472.7 |
| aldose epimerase | DI534_05150 | Not Available | Positive | 1091172 - 1092107 | 33429.4 |
| hypothetical protein | DI534_05155 | Not Available | Positive | 1092104 - 1093021 | 33076.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
