Flavobacterium johnsoniae

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium johnsoniae is a Gram-negative, nonsporulating rod-shaped bacterium that thrives in aerobic conditions. This microbe is known for its optimal growth at a temperature of 20.0°C, indicating a preference for cooler environments. F. johnsoniae has been isolated from multiple habitats, suggesting a versatile ecological niche that may include both aquatic and terrestrial ecosystems. The rod shape and aerobic metabolism of F. johnsoniae are characteristic features that may facilitate its survival in oxygen-rich environments, enabling it to utilize available organic substrates effectively. The adaptability of F. johnsoniae to diverse habitats underscores its potential role in nutrient cycling and decomposition processes within those ecosystems. Interestingly, the ability of F. johnsoniae to thrive in various environments may also contribute to its significance in microbial community dynamics, where it could interact with other microorganisms, influencing community structure and function. This adaptability and ecological versatility make Flavobacterium johnsoniae an intriguing subject for further research in microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium johnsoniae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Flavobacterium johnsoniae
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium johnsoniae

Accession NumberQFQE00000000.1

Gene Summary

Adenine Count

1022784 bp

Thymine Count

1013437 bp

Guanine Count

625170 bp

Cytosine Count

619036 bp

Genome Length

3280522 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinDI548_00005Not Available+17 - 157959552.9
Ncrna_class:rnase_p_rnaNot AvailableNot Available+268 - 582Not Available
5s ribosomal rnaNot AvailableNot Available+501 - 610Not Available
amidohydrolaseDI548_00010Not Available-1582 - 234329400.3
Ncrna_class:srp_rnaNot AvailableNot Available+4881 - 4979Not Available
alpha-mannosidaseDI548_00015Not Available-2414 - 5212106641.0
succinate dehydrogenase/fumarate reductase iron-sulfur subunitDI548_00020Not Available-5347 - 610827904.3
hypothetical proteinDI548_00025Not Available-6126 - 670121558.0
fumarate reductase/succinate dehydrogenase flavoprotein subunitDI548_00030Not Available-6710 - 871974482.8
succinate dehydrogenaseDI548_00035Not Available-8734 - 955230623.7

Displaying genes 1 – 10 of 3426 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

55 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da
BASm0017409PA(16:0/18:1(9Z))C37H71O8PChemical structure of PA(16:0/18:1(9Z))NULL
Average674.941Da
Monoisotopic674.488656244Da
BASm0017415PA(18:1(9Z)/18:1(9Z))C39H73O8PChemical structure of PA(18:1(9Z)/18:1(9Z))14268-17-8
Average700.979Da
Monoisotopic700.504306309Da
BASm0017417PE(14:0/16:0)C35H70NO8PChemical structure of PE(14:0/16:0)NULL
Average663.918Da
Monoisotopic663.483905216Da

Displaying 1–10 of 55 metabolites