Rhodococcus sp. AQ5-07

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. AQ5-07 is a notable bacterial strain characterized by the presence of flagella, which suggests motility. This feature may enhance its ability to navigate through various environments, potentially aiding in colonization and interaction with substrates. The strain has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and genetic stability. The accession number for Rhodococcus sp. AQ5-07 is QEUH00000000.1, which provides a reference for researchers seeking genomic information related to this strain. The presence of a single replicon can be indicative of a simplified genomic organization, which might influence metabolic capabilities and adaptability. Rhodococcus species are known for their versatility and ability to degrade a wide range of organic compounds, including pollutants. The motility conferred by flagella may enhance the strain's ecological role in bioremediation processes, as it can potentially move toward and degrade contaminants in its environment. This trait, together with its genomic features, positions Rhodococcus sp. AQ5-07 as a candidate for further studies in microbial ecology and bioremediation applications. Understanding its metabolic pathways and ecological interactions could be key in utilizing this strain for environmental cleanup efforts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. AQ5-07
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. AQ5-07 Scaffold33_1, whole genome shotgun

Gene Summary

Adenine Count

1278461 bp

Thymine Count

1261476 bp

Guanine Count

2089266 bp

Cytosine Count

2120018 bp

Genome Length

6749221 bp

Protein-coding Genes

6139 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein pafcCVN56_24045Not AvailableNegative5072306 - 507328335375.8
yafy family transcriptional regulatorCVN56_24050Not AvailableNegative5073283 - 507429636453.9
pup--protein ligase 2CVN56_24055Not AvailableNegative5074407 - 507575050348.7
phosphatase pap2 family proteinCVN56_24060Not AvailablePositive5075865 - 507732851654.1
proteasome subunit alphaCVN56_24065Not AvailableNegative5077366 - 507813327905.0
proteasome subunit betaCVN56_24070Not AvailableNegative5078130 - 507900830399.8
ubiquitin-like protein pupCVN56_24075Not AvailableNegative5079005 - 50791996916.59
proteasome accessory factor pafa2CVN56_24080Not AvailableNegative5079347 - 508084654683.9
nudix domain-containing proteinCVN56_24085Not AvailablePositive5080905 - 508146220468.8
tigr00266 family proteinCVN56_24090Not AvailableNegative5081529 - 508220623780.5

Displaying genes 4781 – 4790 of 6223 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.