Rhodococcus sp. AQ5-07

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. AQ5-07 is a notable bacterial strain characterized by the presence of flagella, which suggests motility. This feature may enhance its ability to navigate through various environments, potentially aiding in colonization and interaction with substrates. The strain has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and genetic stability. The accession number for Rhodococcus sp. AQ5-07 is QEUH00000000.1, which provides a reference for researchers seeking genomic information related to this strain. The presence of a single replicon can be indicative of a simplified genomic organization, which might influence metabolic capabilities and adaptability. Rhodococcus species are known for their versatility and ability to degrade a wide range of organic compounds, including pollutants. The motility conferred by flagella may enhance the strain's ecological role in bioremediation processes, as it can potentially move toward and degrade contaminants in its environment. This trait, together with its genomic features, positions Rhodococcus sp. AQ5-07 as a candidate for further studies in microbial ecology and bioremediation applications. Understanding its metabolic pathways and ecological interactions could be key in utilizing this strain for environmental cleanup efforts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. AQ5-07
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. AQ5-07 Scaffold33_1, whole genome shotgun

Gene Summary

Adenine Count

1278461 bp

Thymine Count

1261476 bp

Guanine Count

2089266 bp

Cytosine Count

2120018 bp

Genome Length

6749221 bp

Protein-coding Genes

6139 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gntr family transcriptional regulatorCVN56_13040Not AvailableNegative2724855 - 272559827102.4
tigr03364 family fad-dependent oxidoreductaseCVN56_13045Not AvailablePositive2725695 - 272682240710.4
phosphonatase-like hydrolaseCVN56_13050Not AvailablePositive2726848 - 272752523368.7
2-aminoethylphosphonate abc transporter substrate-binding proteinCVN56_13055Not AvailablePositive2727551 - 272860036302.4
phosphonate abc transporter atp-binding proteinCVN56_13060Not AvailablePositive2728603 - 272977841444.0
2-aminoethylphosphonate abc transporter permease subunitCVN56_13065Not AvailablePositive2729775 - 273067732065.9
abc transporter permease subunitCVN56_13070Not AvailablePositive2730652 - 273143727337.2
amp-dependent synthetaseCVN56_13075Not AvailableNegative2731495 - 273311758070.5
helix-turn-helix transcriptional regulatorCVN56_13080Not AvailablePositive2733248 - 273410530513.6
penicillin-binding transpeptidase domain-containing proteinCVN56_13085Not AvailableNegative2734110 - 273585261139.7

Displaying genes 2601 – 2610 of 6223 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.