Rhodococcus sp. AQ5-07

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. AQ5-07 is a notable bacterial strain characterized by the presence of flagella, which suggests motility. This feature may enhance its ability to navigate through various environments, potentially aiding in colonization and interaction with substrates. The strain has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and genetic stability. The accession number for Rhodococcus sp. AQ5-07 is QEUH00000000.1, which provides a reference for researchers seeking genomic information related to this strain. The presence of a single replicon can be indicative of a simplified genomic organization, which might influence metabolic capabilities and adaptability. Rhodococcus species are known for their versatility and ability to degrade a wide range of organic compounds, including pollutants. The motility conferred by flagella may enhance the strain's ecological role in bioremediation processes, as it can potentially move toward and degrade contaminants in its environment. This trait, together with its genomic features, positions Rhodococcus sp. AQ5-07 as a candidate for further studies in microbial ecology and bioremediation applications. Understanding its metabolic pathways and ecological interactions could be key in utilizing this strain for environmental cleanup efforts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. AQ5-07
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. AQ5-07 Scaffold33_1, whole genome shotgun

Gene Summary

Adenine Count

1278461 bp

Thymine Count

1261476 bp

Guanine Count

2089266 bp

Cytosine Count

2120018 bp

Genome Length

6749221 bp

Protein-coding Genes

6139 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ppox class f420-dependent oxidoreductaseCVN56_12890Not AvailableNegative2694892 - 269535316939.9
phzf family phenazine biosynthesis isomeraseCVN56_12895Not AvailablePositive2695466 - 269634430709.0
hypothetical proteinCVN56_12900Not AvailablePositive2696433 - 269685814379.2
antar domain-containing proteinCVN56_12905Not AvailableNegative2696855 - 269768829588.6
rna polymerase sigma factorCVN56_12910Not AvailableNegative2697765 - 269833421472.5
cobyric acid synthase cobqCVN56_12915Not AvailableNegative2698419 - 269993052552.9
type i methionyl aminopeptidaseCVN56_12920Not AvailableNegative2699939 - 270079631137.1
hypothetical proteinCVN56_12925Not AvailableNegative2700826 - 270154526579.6
qace family quaternary ammonium compound efflux smr transporterCVN56_12930Not AvailablePositive2701599 - 270194911826.7
qace family quaternary ammonium compound efflux smr transporterCVN56_12935Not AvailablePositive2701946 - 270227211239.2

Displaying genes 2571 – 2580 of 6223 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.