Rhodococcus sp. AQ5-07

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. AQ5-07 is a notable bacterial strain characterized by the presence of flagella, which suggests motility. This feature may enhance its ability to navigate through various environments, potentially aiding in colonization and interaction with substrates. The strain has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and genetic stability. The accession number for Rhodococcus sp. AQ5-07 is QEUH00000000.1, which provides a reference for researchers seeking genomic information related to this strain. The presence of a single replicon can be indicative of a simplified genomic organization, which might influence metabolic capabilities and adaptability. Rhodococcus species are known for their versatility and ability to degrade a wide range of organic compounds, including pollutants. The motility conferred by flagella may enhance the strain's ecological role in bioremediation processes, as it can potentially move toward and degrade contaminants in its environment. This trait, together with its genomic features, positions Rhodococcus sp. AQ5-07 as a candidate for further studies in microbial ecology and bioremediation applications. Understanding its metabolic pathways and ecological interactions could be key in utilizing this strain for environmental cleanup efforts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. AQ5-07
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. AQ5-07 Scaffold33_1, whole genome shotgun

Gene Summary

Adenine Count

1278461 bp

Thymine Count

1261476 bp

Guanine Count

2089266 bp

Cytosine Count

2120018 bp

Genome Length

6749221 bp

Protein-coding Genes

6139 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pseudouridine synthaseCVN56_06640Not AvailablePositive1417107 - 141803035164.8
metal-binding proteinCVN56_06645Not AvailablePositive1418106 - 141964156662.8
universal stress proteinCVN56_06650Not AvailablePositive1419690 - 142058030656.3
vit family proteinCVN56_06655Not AvailableNegative1420635 - 142137525275.3
sdr family nad(p)-dependent oxidoreductaseCVN56_06660Not AvailablePositive1421506 - 142226426183.0
tetr/acrr family transcriptional regulatorCVN56_06665Not AvailableNegative1422268 - 142290623588.4
putative lipid ii flippase ftswCVN56_06670Not AvailableNegative1423015 - 142439149904.0
mfs transporterCVN56_06675Not AvailableNegative1424616 - 142597446662.1
f420-dependent methylene-tetrahydromethanopterin reductaseCVN56_06680Not AvailableNegative1426047 - 142744150868.0
llm class flavin-dependent oxidoreductaseCVN56_06685Not AvailableNegative1427471 - 142855038422.0

Displaying genes 1341 – 1350 of 6223 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.