Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DBR40_03260 | Not Available | Positive | 766864 - 767700 | 31874.3 |
| agmatine deiminase | DBR40_03265 | Not Available | Positive | 767775 - 768893 | 41449.6 |
| peptide-binding protein | DBR40_03270 | Not Available | Negative | 769073 - 771418 | 87047.5 |
| short-chain dehydrogenase | DBR40_03275 | Not Available | Negative | 771693 - 772433 | 25898.2 |
| transcriptional regulator | DBR40_03280 | Not Available | Positive | 772512 - 772892 | 14664.8 |
| hypothetical protein | DBR40_03285 | Not Available | Negative | 772978 - 773382 | 14813.6 |
| hypothetical protein | DBR40_03290 | Not Available | Negative | 773446 - 773754 | 12399.4 |
| susc/raga family tonb-linked outer membrane protein | DBR40_03295 | Not Available | Positive | 774104 - 777304 | 116579.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR40_03300 | Not Available | Positive | 777331 - 778887 | 57261.9 |
| susc/raga family tonb-linked outer membrane protein | DBR40_03305 | Not Available | Positive | 779253 - 782390 | 114915.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

