Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family protein | DBR40_03060 | Not Available | Positive | 705233 - 708505 | 118083.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR40_03065 | Not Available | Positive | 708516 - 710045 | 56624.4 |
| hybrid sensor histidine kinase/response regulator | DBR40_03070 | Not Available | Negative | 710931 - 714977 | 152497.0 |
| hypothetical protein | DBR40_03075 | Not Available | Positive | 715337 - 718654 | 120541.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR40_03080 | Not Available | Positive | 718665 - 720425 | 65378.2 |
| chondroitinase | DBR40_03085 | Not Available | Positive | 720697 - 722805 | 78655.2 |
| glucuronyl hydrolase | DBR40_03090 | Not Available | Positive | 722894 - 724078 | 44660.3 |
| hypothetical protein | DBR40_03095 | Not Available | Positive | 724096 - 725325 | 46286.4 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | DBR40_03100 | Not Available | Positive | 725411 - 726250 | 31335.2 |
| 2-deoxy-d-gluconate 3-dehydrogenase | DBR40_03105 | Not Available | Positive | 726331 - 727095 | 26945.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

