Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-n-acetylglucosaminidase | DBR40_02760 | Not Available | Negative | 626688 - 628895 | 85092.1 |
| duf5009 domain-containing protein | DBR40_02765 | Not Available | Negative | 628897 - 630129 | 45709.4 |
| acid phosphatase | DBR40_02770 | Not Available | Negative | 630158 - 631138 | 36540.4 |
| ragb/susd family nutrient uptake outer membrane protein | DBR40_02775 | Not Available | Negative | 631256 - 632929 | 61558.8 |
| susc/raga family tonb-linked outer membrane protein | DBR40_02780 | Not Available | Negative | 632948 - 635986 | 109785.0 |
| inositol oxygenase | DBR40_02785 | Not Available | Negative | 636049 - 636936 | 35092.1 |
| hypothetical protein | DBR40_02790 | Not Available | Positive | 637063 - 637254 | 7213.76 |
| laci family transcriptional regulator | DBR40_02795 | Not Available | Positive | 637420 - 638427 | 37593.9 |
| sodium transporter | DBR40_02800 | Not Available | Positive | 638551 - 640179 | 59835.7 |
| glycoside hydrolase | DBR40_02805 | Not Available | Positive | 640236 - 641651 | 51528.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

