Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DBR40_25220 | Not Available | Positive | 6055205 - 6055888 | 24460.6 |
| s9 family peptidase | DBR40_25225 | Not Available | Positive | 6055985 - 6058153 | 80967.0 |
| duf3307 domain-containing protein | DBR40_25230 | Not Available | Negative | 6058195 - 6058905 | 26920.1 |
| transcriptional regulator | DBR40_25235 | Not Available | Negative | 6058910 - 6059515 | 22291.3 |
| dna ligase-associated dexh box helicase | DBR40_25240 | Not Available | Positive | 6059643 - 6060677 | 38508.6 |
| atp-dependent dna ligase | DBR40_25245 | Not Available | Positive | 6060674 - 6062263 | 60993.1 |
| dna ligase-associated dexh box helicase | DBR40_25250 | Not Available | Positive | 6062325 - 6064802 | 93896.7 |
| phosphoesterase | DBR40_25255 | Not Available | Positive | 6064912 - 6065550 | 23776.8 |
| thioredoxin | DBR40_25260 | Not Available | Negative | 6065551 - 6065847 | 10739.1 |
| hypothetical protein | DBR40_25265 | Not Available | Negative | 6065963 - 6066577 | 23334.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

