Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | DBR40_02305 | Not Available | Negative | 526945 - 527382 | 16281.3 |
| a/g-specific adenine glycosylase | DBR40_02310 | Not Available | Negative | 527437 - 528498 | 40853.9 |
| integration host factor subunit beta | DBR40_02315 | Not Available | Positive | 528669 - 528971 | 11090.6 |
| hypothetical protein | DBR40_02320 | Not Available | Positive | 528984 - 529862 | 31106.4 |
| ribonuclease e/g | DBR40_02325 | Not Available | Positive | 530147 - 531697 | 58725.5 |
| dna repair protein rada | DBR40_02330 | Not Available | Positive | 531861 - 533237 | 50371.7 |
| duf4920 domain-containing protein | DBR40_02335 | Not Available | Positive | 533577 - 534041 | 17025.1 |
| branched chain amino acid aminotransferase | DBR40_02340 | Not Available | Negative | 534121 - 535185 | 39315.7 |
| chloride channel protein | DBR40_02345 | Not Available | Positive | 535537 - 536826 | 45906.5 |
| phosphoserine phosphatase | DBR40_02350 | Not Available | Negative | 537064 - 538365 | 49305.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

