Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | DBR40_22785 | Not Available | Positive | 5532035 - 5532778 | 27317.9 |
| gliding motility lipoprotein gldd | DBR40_22790 | Not Available | Positive | 5532825 - 5533412 | 22990.5 |
| mbl fold hydrolase | DBR40_22795 | Not Available | Positive | 5533420 - 5534058 | 23580.9 |
| hypothetical protein | DBR40_22800 | Not Available | Positive | 5534195 - 5535430 | 45715.8 |
| hypothetical protein | DBR40_22805 | Not Available | Positive | 5535432 - 5535815 | 14185.0 |
| transposase | DBR40_22810 | Not Available | Negative | 5535908 - 5536354 | 16752.0 |
| sodium transporter | DBR40_22815 | Not Available | Negative | 5536388 - 5538055 | 60895.8 |
| xylose isomerase | DBR40_22820 | Not Available | Negative | 5538181 - 5539512 | 49969.4 |
| carbohydrate kinase | DBR40_22825 | Not Available | Negative | 5539589 - 5541073 | 53845.3 |
| pp_04518 | DBR40_22830 | Not Available | Positive | 5541283 - 5541618 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

