Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DBR40_20950 | Not Available | Positive | 5051334 - 5052860 | 55463.3 |
| glucosylceramidase | DBR40_20955 | Not Available | Positive | 5052949 - 5054352 | 51075.2 |
| glycosyl hydrolase family 5 | DBR40_20960 | Not Available | Positive | 5054370 - 5056121 | 66648.6 |
| hypothetical protein | DBR40_20965 | Not Available | Positive | 5056176 - 5057336 | 43158.4 |
| hypothetical protein | DBR40_20970 | Not Available | Positive | 5057429 - 5059753 | 86844.5 |
| hypothetical protein | DBR40_20975 | Not Available | Positive | 5059757 - 5060563 | 30041.4 |
| d-glycerate dehydrogenase | DBR40_20980 | Not Available | Positive | 5060606 - 5061574 | 35057.5 |
| hypothetical protein | DBR40_20985 | Not Available | Negative | 5061667 - 5064354 | 98707.5 |
| nad(p)h-dependent oxidoreductase | DBR40_20990 | Not Available | Negative | 5064817 - 5065449 | 23114.8 |
| endonuclease | DBR40_20995 | Not Available | Negative | 5065661 - 5066770 | 41987.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

