Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DBR40_20295 | Not Available | Positive | 4908707 - 4912006 | 118555.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DBR40_20300 | Not Available | Positive | 4912026 - 4913606 | 58182.7 |
| susc/raga family tonb-linked outer membrane protein | DBR40_20305 | Not Available | Positive | 4913993 - 4917142 | 116096.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR40_20310 | Not Available | Positive | 4917154 - 4918605 | 54490.7 |
| hypothetical protein | DBR40_20315 | Not Available | Positive | 4918617 - 4919318 | 26175.6 |
| duf5007 domain-containing protein | DBR40_20320 | Not Available | Positive | 4919330 - 4920391 | 39551.3 |
| hypothetical protein | DBR40_20325 | Not Available | Positive | 4920421 - 4920807 | 13606.1 |
| carboxypeptidase | DBR40_20330 | Not Available | Positive | 4920957 - 4922516 | 58230.2 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | DBR40_20335 | Not Available | Positive | 4923067 - 4924029 | 35812.3 |
| duf2723 domain-containing protein | DBR40_20340 | Not Available | Negative | 4924296 - 4927337 | 114385.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

