Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DBR40_19445 | Not Available | Positive | 4695378 - 4696802 | 54005.9 |
| zinc-dependent metalloprotease | DBR40_19450 | Not Available | Positive | 4696807 - 4699257 | 92857.7 |
| hypothetical protein | DBR40_19455 | Not Available | Positive | 4699259 - 4699795 | 19877.4 |
| hypothetical protein | DBR40_19460 | Not Available | Negative | 4699902 - 4701725 | 66746.6 |
| rna polymerase subunit sigma-70 | DBR40_19465 | Not Available | Positive | 4702455 - 4703018 | 21949.5 |
| anti-sigma factor | DBR40_19470 | Not Available | Positive | 4703093 - 4704262 | 43391.6 |
| susc/raga family tonb-linked outer membrane protein | DBR40_19475 | Not Available | Positive | 4704365 - 4707757 | 123297.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR40_19480 | Not Available | Positive | 4707769 - 4709421 | 61801.1 |
| arylsulfatase | DBR40_19485 | Not Available | Positive | 4709422 - 4710918 | 54175.1 |
| methyltransferase type 11 | DBR40_19490 | Not Available | Positive | 4711474 - 4712340 | 31479.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

