Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr family transcriptional regulator | DBR40_18645 | Not Available | Positive | 4511517 - 4512221 | 26824.6 |
| carboxymuconolactone decarboxylase family protein | DBR40_18650 | Not Available | Positive | 4512385 - 4512837 | 16951.3 |
| transcription initiation protein | DBR40_18655 | Not Available | Positive | 4512927 - 4513274 | 13033.7 |
| rna polymerase subunit sigma | DBR40_18660 | Not Available | Positive | 4513310 - 4514545 | 46667.1 |
| hypothetical protein | DBR40_18665 | Not Available | Negative | 4514577 - 4515158 | 21638.4 |
| hypothetical protein | DBR40_18670 | Not Available | Negative | 4515209 - 4515475 | 10012.7 |
| hypothetical protein | DBR40_18675 | Not Available | Negative | 4515532 - 4515798 | 10012.4 |
| rna polymerase subunit sigma-24 | DBR40_18680 | Not Available | Negative | 4515800 - 4516390 | 22856.2 |
| thiosulfate reductase | DBR40_18685 | Not Available | Positive | 4516556 - 4517275 | 28067.6 |
| molybdopterin-binding oxidoreductase | DBR40_18690 | Not Available | Positive | 4517256 - 4518050 | 30249.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

