Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis protein thif | DBR40_17435 | Not Available | Positive | 4216827 - 4217864 | 37897.7 |
| iron dicitrate transport regulator fecr | DBR40_17440 | Not Available | Negative | 4218060 - 4218737 | 24626.8 |
| rna polymerase sigma-70 factor | DBR40_17445 | Not Available | Negative | 4218798 - 4219346 | 21778.6 |
| hypothetical protein | DBR40_17450 | Not Available | Negative | 4219725 - 4219928 | 7250.89 |
| susc/raga family tonb-linked outer membrane protein | DBR40_17455 | Not Available | Positive | 4220125 - 4223148 | 112827.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR40_17460 | Not Available | Positive | 4223213 - 4224697 | 55244.8 |
| hypothetical protein | DBR40_17465 | Not Available | Positive | 4224700 - 4225362 | 24167.8 |
| duf5007 domain-containing protein | DBR40_17470 | Not Available | Positive | 4225376 - 4226398 | 37684.2 |
| susc/raga family tonb-linked outer membrane protein | DBR40_17475 | Not Available | Positive | 4226421 - 4229615 | 116491.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR40_17480 | Not Available | Positive | 4229627 - 4231183 | 59544.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

