Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-tyrosyl-trna(tyr) deacylase | DBR40_15430 | Not Available | Negative | 3770076 - 3770528 | 16297.9 |
| hypothetical protein | DBR40_15435 | Not Available | Positive | 3770541 - 3771584 | 40226.7 |
| hypothetical protein | DBR40_15440 | Not Available | Positive | 3771553 - 3774006 | 93907.0 |
| 3-oxoacyl-acp synthase | DBR40_15445 | Not Available | Negative | 3774133 - 3775179 | 38151.6 |
| clp protease clps | DBR40_15450 | Not Available | Positive | 3775332 - 3775613 | 10923.0 |
| thioredoxin family protein | DBR40_15455 | Not Available | Negative | 3775693 - 3776295 | 22476.9 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | DBR40_15460 | Not Available | Negative | 3776532 - 3777317 | 29829.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DBR40_15465 | Not Available | Positive | 3777501 - 3778580 | 39187.9 |
| mfs transporter | DBR40_15470 | Not Available | Positive | 3778766 - 3779947 | 42734.1 |
| sulfurtransferase | DBR40_15475 | Not Available | Positive | 3779937 - 3780779 | 30597.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

