Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter sp. KBW01
Accession NumberQAJQ00000000.1
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | DBR40_21665 | Not Available | - | 5210539 - 5211189 | 25048.9 |
| 5s ribosomal rna | Not Available | Not Available | + | 3 - 114 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 57 - 168 | Not Available |
| hypothetical protein | DBR40_00005 | Not Available | + | 220 - 3189 | 111287.0 |
| 23s ribosomal rna | Not Available | Not Available | + | 252 - 3130 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 3842 - 5362 | Not Available |
| transcriptional initiation protein tat | DBR40_00010 | Not Available | - | 3697 - 4329 | 23474.2 |
| gmc family oxidoreductase | DBR40_00015 | Not Available | - | 4342 - 6078 | 63702.1 |
| sam-dependent methyltransferase | DBR40_00020 | Not Available | + | 6368 - 7555 | 44742.1 |
| duf1304 domain-containing protein | DBR40_00030 | Not Available | - | 8446 - 8805 | 13201.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.