Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yigz family protein | DBR40_12260 | Not Available | Negative | 2989666 - 2990280 | 23013.8 |
| transporter | DBR40_12265 | Not Available | Negative | 2990267 - 2991133 | 31671.4 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DBR40_12270 | Not Available | Negative | 2991130 - 2992185 | 39392.1 |
| peptide chain release factor n(5)-glutamine methyltransferase | DBR40_12275 | Not Available | Positive | 2992350 - 2993207 | 32177.1 |
| site-specific tyrosine recombinase xerd | DBR40_12280 | Not Available | Negative | 2993204 - 2994103 | 33972.3 |
| type ii 3-dehydroquinate dehydratase | DBR40_12285 | Not Available | Positive | 2994251 - 2994667 | 15259.4 |
| hypothetical protein | DBR40_12290 | Not Available | Positive | 2994680 - 2995396 | 27222.9 |
| glycosyl transferase family 2 | DBR40_12295 | Not Available | Negative | 2995522 - 2996535 | 38888.7 |
| hypothetical protein | DBR40_12300 | Not Available | Negative | 2996593 - 2996784 | 7740.58 |
| hypothetical protein | DBR40_12305 | Not Available | Positive | 2996795 - 2997406 | 24371.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

