Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DBR40_10395 | Not Available | Positive | 2512288 - 2515818 | 130502.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR40_10400 | Not Available | Positive | 2515829 - 2517610 | 66275.8 |
| metallophosphoesterase | DBR40_10405 | Not Available | Positive | 2517762 - 2518679 | 34930.5 |
| short chain dehydrogenase | DBR40_10410 | Not Available | Negative | 2519075 - 2519857 | 28186.7 |
| altronate hydrolase | DBR40_10415 | Not Available | Negative | 2520042 - 2521679 | 59689.3 |
| l-fucose:h+ symporter permease | DBR40_10420 | Not Available | Negative | 2521713 - 2523023 | 47365.9 |
| arac family transcriptional regulator | DBR40_10430 | Not Available | Positive | 2523356 - 2524225 | 33386.3 |
| arac family transcriptional regulator | DBR40_10435 | Not Available | Negative | 2524313 - 2525272 | 35988.4 |
| hypothetical protein | DBR40_10440 | Not Available | Positive | 2525409 - 2525903 | 18822.9 |
| dinb family protein | DBR40_10445 | Not Available | Positive | 2525907 - 2526422 | 19425.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

