Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | DBR40_09885 | Not Available | Positive | 2391082 - 2392242 | 43799.7 |
| hypothetical protein | DBR40_09890 | Not Available | Negative | 2392507 - 2393073 | 20531.2 |
| porin | DBR40_09895 | Not Available | Negative | 2393153 - 2394484 | 50063.4 |
| amino acid permease | DBR40_09900 | Not Available | Negative | 2394584 - 2396059 | 52317.9 |
| sodium-translocating pyrophosphatase | DBR40_09905 | Not Available | Negative | 2396175 - 2398421 | 78456.4 |
| amino acid transporter | DBR40_09910 | Not Available | Positive | 2398685 - 2400127 | 52431.3 |
| tigr01212 family radical sam protein | DBR40_09915 | Not Available | Positive | 2400368 - 2401315 | 36134.3 |
| ammonia channel protein | DBR40_09920 | Not Available | Positive | 2401662 - 2403071 | 49841.4 |
| porin | DBR40_09925 | Not Available | Positive | 2403109 - 2404128 | 36009.4 |
| hypothetical protein | DBR40_09930 | Not Available | Positive | 2404224 - 2404805 | 22011.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

