Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family protein | DBR40_05940 | Not Available | Negative | 1384006 - 1385298 | 46462.7 |
| susc/raga family tonb-linked outer membrane protein | DBR40_05945 | Not Available | Negative | 1385315 - 1388419 | 111807.0 |
| anhydro-n-acetylmuramic acid kinase | DBR40_05950 | Not Available | Negative | 1388559 - 1389755 | 43502.1 |
| glucosamine-6-phosphate deaminase | DBR40_05955 | Not Available | Positive | 1389908 - 1391833 | 72517.4 |
| glycoside hydrolase | DBR40_05965 | Not Available | Negative | 1394234 - 1395778 | 58736.8 |
| hypothetical protein | DBR40_05970 | Not Available | Positive | 1395985 - 1396887 | 34063.7 |
| two-component sensor histidine kinase | DBR40_05975 | Not Available | Negative | 1396919 - 1400650 | 142275.0 |
| [acyl-carrier-protein] s-malonyltransferase | DBR40_05980 | Not Available | Negative | 1400739 - 1401620 | 30878.3 |
| gtp cyclohydrolase i fole | DBR40_05985 | Not Available | Negative | 1401701 - 1402336 | 23896.8 |
| 6-pyruvoyl tetrahydrobiopterin synthase | DBR40_05990 | Not Available | Negative | 1402349 - 1402759 | 15801.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

