Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. KBW01 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1952321 bp
Thymine Count
1941447 bp
Guanine Count
1277025 bp
Cytosine Count
1311809 bp
Genome Length
6484038 bp
Protein-coding Genes
5284 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | DBR40_00385 | Not Available | Positive | 87921 - 88925 | 36375.4 |
| peptidase m16 | DBR40_00390 | Not Available | Negative | 89084 - 92017 | 109490.0 |
| hypothetical protein | DBR40_00395 | Not Available | Positive | 92022 - 92165 | 5824.3 |
| 5'/3'-nucleotidase sure | DBR40_00400 | Not Available | Positive | 93069 - 93914 | 30662.6 |
| stationary phase survival protein sure | DBR40_00405 | Not Available | Positive | 93925 - 94197 | 10037.6 |
| lipid-a-disaccharide synthase | DBR40_00410 | Not Available | Positive | 94370 - 95476 | 40885.3 |
| laci family transcriptional regulator | DBR40_00415 | Not Available | Positive | 95680 - 96684 | 37453.1 |
| susc/raga family tonb-linked outer membrane protein | DBR40_00420 | Not Available | Positive | 97012 - 100047 | 111268.0 |
| ragb/susd family nutrient uptake outer membrane protein | DBR40_00425 | Not Available | Positive | 100058 - 101716 | 62238.7 |
| glutaminase | DBR40_00430 | Not Available | Positive | 102030 - 104474 | 91643.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

