Photorhabdus luminescens strain H5

Rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus luminescens strain H5 is a Gram-negative, facultative anaerobic bacterium characterized by its rod shape and true flagella. This strain primarily inhabits the guts of nematodes and the rhizosphere, indicating its ecological role within soil environments and its association with nematode hosts. The bacterium has been identified to possess a single replicon, which contributes to its genetic stability and adaptability. It has a broad range of hosts, including Homo sapiens, various insect species such as Galleria mellonella and Plutella xylostella, as well as nematodes like Caenorhabditis elegans and Heterorhabditis sp. This diverse host range underlines its potential as a pathogenic agent in both animal and human contexts, notably associated with septicemia in humans. The presence of Photorhabdus luminescens strain H5 in the guts of nematodes suggests a symbiotic relationship, where it may provide benefits to its hosts while also exploiting them under certain conditions. The ability of this bacterium to thrive in the rhizosphere may also indicate its role in soil health and plant interactions. Understanding the interactions between P. luminescens and its hosts can provide insights into its ecological significance and potential applications in biocontrol and microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus luminescens
Strainstrain H5

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus luminescens strain H5
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatguts of nematodes; rhizosphere
Biotic relationshipNot Available
Host(s)Homo sapiens, Insecta, Galleria mellonella
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal; Human

Genome Summary

Photorhabdus luminescens strain H5

Gene Summary

Adenine Count

1550291 bp

Thymine Count

1544755 bp

Guanine Count

1142306 bp

Cytosine Count

1157959 bp

Genome Length

5395311 bp

Protein-coding Genes

4087 genes

Non-Coding Genes

254 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
plasmid pria4b orf-3 family proteinC6H65_05585Not AvailablePositive1227007 - 122762124281.3
hypothetical proteinC6H65_05590Not AvailablePositive1228448 - 123020267004.7
hypothetical proteinC6H65_05600Not AvailablePositive1232139 - 123289728789.0
hypothetical proteinC6H65_05605Not AvailablePositive1232925 - 123366827930.7
type vi secretion system tip protein vgrgC6H65_05610Not AvailablePositive1233723 - 123570275119.6
duf4123 domain-containing proteinC6H65_05615Not AvailablePositive1235699 - 123649030341.9
type i-e crispr-associated protein cas6/cse3/caseC6H65_05620Not AvailableNegative1237520 - 123819425742.4
type i-e crispr-associated protein cas5/casdC6H65_05625Not AvailableNegative1238181 - 123892728121.0
type i-e crispr-associated protein cas7/cse4/cascC6H65_05630Not AvailableNegative1238938 - 123997237619.7
type i-e crispr-associated protein cse2/casbC6H65_05635Not AvailableNegative1239993 - 124057421919.7

Displaying genes 1181 – 1190 of 4341 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
SepticemiaCausesPMC5895068

Displaying health effects 1 – 1 of 1 in total