Photorhabdus hindustanensis strain H1 H1_REP_C679

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus hindustanensis strain H1 (H1_REP_C679) is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella. This motility feature suggests an ability to navigate its environment, which is important for its ecological interactions. The strain is cataloged under the accession number PUWT00000000.1, highlighting its documented genetic information. Photorhabdus species are known for their symbiotic relationships with nematodes, particularly in the context of insect pathogens. While specific ecological interactions of strain H1 are not detailed, the presence of flagella may indicate a potential for mobility and colonization in diverse habitats. The bacterium has a single replicon, which typically suggests a streamlined genetic architecture that can be advantageous for rapid adaptation and survival in fluctuating environments. In summary, the traits of Photorhabdus hindustanensis strain H1 reflect its potential ecological roles, particularly in relation to its motility and genetic organization. Understanding these characteristics can contribute to insights into the ecological dynamics of Photorhabdus species, particularly in their interactions within soil ecosystems and their roles in controlling insect populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus hindustanensis
Strainstrain H1 H1_REP_C679

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus hindustanensis strain H1 H1_REP_C679
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus hindustanensis strain H1 H1_REP_C679, whole genome

Gene Summary

Adenine Count

1604985 bp

Thymine Count

1631412 bp

Guanine Count

1229749 bp

Cytosine Count

1197520 bp

Genome Length

5663704 bp

Protein-coding Genes

4330 genes

Non-Coding Genes

370 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseC6H66_13430Not AvailablePositive3063921 - 306473929764.0
gamma carbonic anhydrase family proteinC6H66_13440Not AvailableNegative3064976 - 306552119579.8
is630 family transposaseC6H66_13450Not AvailableNegative3066104 - 30662445470.91
hypothetical proteinC6H66_13455Not AvailablePositive3066332 - 306661611438.7
hypothetical proteinC6H66_13460Not AvailablePositive3067129 - 306756016459.9
prevent-host-death family proteinC6H66_13465Not AvailablePositive3072084 - 30723449692.43
type i-f crispr-associated protein csy1C6H66_13470Not AvailablePositive3073012 - 307437052629.9
type i-f crispr-associated protein csy2C6H66_13475Not AvailablePositive3074367 - 307533536627.0
type i-f crispr-associated protein csy3C6H66_13480Not AvailablePositive3075359 - 307636937195.1
type i-f crispr-associated endoribonuclease cas6/csy4C6H66_13485Not AvailablePositive3076379 - 307693320988.2

Displaying genes 2731 – 2740 of 4700 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.