Photorhabdus hindustanensis strain H1 H1_REP_C679

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus hindustanensis strain H1 (H1_REP_C679) is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella. This motility feature suggests an ability to navigate its environment, which is important for its ecological interactions. The strain is cataloged under the accession number PUWT00000000.1, highlighting its documented genetic information. Photorhabdus species are known for their symbiotic relationships with nematodes, particularly in the context of insect pathogens. While specific ecological interactions of strain H1 are not detailed, the presence of flagella may indicate a potential for mobility and colonization in diverse habitats. The bacterium has a single replicon, which typically suggests a streamlined genetic architecture that can be advantageous for rapid adaptation and survival in fluctuating environments. In summary, the traits of Photorhabdus hindustanensis strain H1 reflect its potential ecological roles, particularly in relation to its motility and genetic organization. Understanding these characteristics can contribute to insights into the ecological dynamics of Photorhabdus species, particularly in their interactions within soil ecosystems and their roles in controlling insect populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus hindustanensis
Strainstrain H1 H1_REP_C679

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus hindustanensis strain H1 H1_REP_C679
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus hindustanensis strain H1 H1_REP_C679, whole genome

Gene Summary

Adenine Count

1604985 bp

Thymine Count

1631412 bp

Guanine Count

1229749 bp

Cytosine Count

1197520 bp

Genome Length

5663704 bp

Protein-coding Genes

4330 genes

Non-Coding Genes

370 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system lipoprotein tssjC6H66_09860Not AvailableNegative2191733 - 219241024992.9
type vi secretion system protein tssaC6H66_09865Not AvailableNegative2192427 - 219350640057.3
type vi secretion proteinC6H66_09870Not AvailableNegative2193523 - 21938259885.69
hypothetical proteinC6H66_09875Not AvailableNegative2193822 - 219441823085.5
type vi secretion system tip protein vgrgC6H66_09880Not AvailableNegative2194453 - 219645974049.1
type vi secretion system baseplate subunit tssgC6H66_09885Not AvailableNegative2196484 - 219745837005.4
type vi secretion system baseplate subunit tssfC6H66_09890Not AvailableNegative2197449 - 219926068753.9
hcp1 family type vi secretion system effectorC6H66_09900Not AvailableNegative2199761 - 220025518109.5
type vi secretion system contractile sheath large subunitC6H66_09905Not AvailableNegative2200312 - 220179355054.0
type vi secretion system contractile sheath small subunitC6H66_09910Not AvailableNegative2201801 - 220232519583.3

Displaying genes 2101 – 2110 of 4700 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.