Photorhabdus hindustanensis strain H1 H1_REP_C679

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus hindustanensis strain H1 (H1_REP_C679) is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella. This motility feature suggests an ability to navigate its environment, which is important for its ecological interactions. The strain is cataloged under the accession number PUWT00000000.1, highlighting its documented genetic information. Photorhabdus species are known for their symbiotic relationships with nematodes, particularly in the context of insect pathogens. While specific ecological interactions of strain H1 are not detailed, the presence of flagella may indicate a potential for mobility and colonization in diverse habitats. The bacterium has a single replicon, which typically suggests a streamlined genetic architecture that can be advantageous for rapid adaptation and survival in fluctuating environments. In summary, the traits of Photorhabdus hindustanensis strain H1 reflect its potential ecological roles, particularly in relation to its motility and genetic organization. Understanding these characteristics can contribute to insights into the ecological dynamics of Photorhabdus species, particularly in their interactions within soil ecosystems and their roles in controlling insect populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus hindustanensis
Strainstrain H1 H1_REP_C679

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus hindustanensis strain H1 H1_REP_C679
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus hindustanensis strain H1 H1_REP_C679, whole genome

Gene Summary

Adenine Count

1604985 bp

Thymine Count

1631412 bp

Guanine Count

1229749 bp

Cytosine Count

1197520 bp

Genome Length

5663704 bp

Protein-coding Genes

4330 genes

Non-Coding Genes

370 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter permeaseC6H66_04005Not AvailableNegative868879 - 86958025847.2
amino acid abc transporter substrate-binding proteinC6H66_04015Not AvailableNegative869980 - 87075328097.1
valine--trna ligaseC6H66_04020Not AvailableNegative871182 - 874079109770.0
dna polymerase iii subunit chiC6H66_04025Not AvailableNegative874093 - 87454217092.3
leucyl aminopeptidaseC6H66_04030Not AvailableNegative874609 - 87612954924.0
lps export abc transporter permease lptfC6H66_04035Not AvailablePositive876416 - 87751640965.1
lipopolysaccharide abc transporter permease lptgC6H66_04040Not AvailablePositive877516 - 87859239797.5
d-alanyl-d-alanine- carboxypeptidase/endopeptidase amphC6H66_04045Not AvailableNegative878678 - 87989544929.9
Trna-leuNot AvailableNot AvailablePositive880386 - 880470Not Available
hypothetical proteinC6H66_04060Not AvailableNegative882013 - 8821264205.14

Displaying genes 1091 – 1100 of 4700 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.