Photorhabdus khanii subsp. guanajuatensis strain MEX20-17

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus khanii subsp. guanajuatensis strain MEX20-17 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which contributes to its motility. This strain has a single replicon, indicating a streamlined genetic architecture that may be advantageous for its adaptability in various environments. The genomic data for this strain can be accessed through the accession number PUJY00000000.1. Photorhabdus species are known for their symbiotic relationships with nematodes and their role in the insect pathogenic process. This particular subspecies, MEX20-17, may play a significant role in the ecology of its environment, particularly in soil ecosystems where it can influence nutrient cycling and interact with various microbial communities. The flagella can enhance its ability to navigate through soil matrices, potentially aiding in its survival and pathogenicity. Overall, the characteristics of Photorhabdus khanii subsp. guanajuatensis strain MEX20-17 highlight its potential ecological significance, particularly in terms of its interactions with host organisms and its contribution to soil microbiomes. Understanding these traits can provide insights into the ecological roles of pathogenic bacteria in their native habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus khanii
Strainsubsp. guanajuatensis strain MEX20-17

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus khanii subsp. guanajuatensis strain MEX20-17
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus khanii subsp. guanajuatensis strain MEX20-17

Gene Summary

Adenine Count

1557604 bp

Thymine Count

1555256 bp

Guanine Count

1186644 bp

Cytosine Count

1211659 bp

Genome Length

5512522 bp

Protein-coding Genes

4371 genes

Non-Coding Genes

345 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transposaseC5467_20610Not AvailableNegative4661655 - 46617412723.29
hypothetical proteinC5467_20615Not AvailableNegative4662191 - 466327639687.7
hypothetical proteinC5467_20620Not AvailableNegative4664027 - 466661595468.0
histidine kinaseC5467_20625Not AvailableNegative4666684 - 466766436392.4
rna polymerase subunit sigmaC5467_20630Not AvailableNegative4667677 - 466818619871.5
cell filamentation protein ficC5467_20635Not AvailablePositive4668675 - 467003051683.2
crispr-associated helicase/endonuclease cas3C5467_20640Not AvailablePositive4670538 - 4673255103652.0
type i-e crispr-associated protein cse1/casaC5467_20645Not AvailablePositive4673270 - 467487460830.0
type i-e crispr-associated protein cse2/casbC5467_20650Not AvailablePositive4674874 - 467545522189.1
type i-e crispr-associated protein cas7/cse4/cascC5467_20655Not AvailablePositive4675476 - 467651037273.3

Displaying genes 3901 – 3910 of 4716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.