Photorhabdus khanii subsp. guanajuatensis strain MEX20-17

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus khanii subsp. guanajuatensis strain MEX20-17 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which contributes to its motility. This strain has a single replicon, indicating a streamlined genetic architecture that may be advantageous for its adaptability in various environments. The genomic data for this strain can be accessed through the accession number PUJY00000000.1. Photorhabdus species are known for their symbiotic relationships with nematodes and their role in the insect pathogenic process. This particular subspecies, MEX20-17, may play a significant role in the ecology of its environment, particularly in soil ecosystems where it can influence nutrient cycling and interact with various microbial communities. The flagella can enhance its ability to navigate through soil matrices, potentially aiding in its survival and pathogenicity. Overall, the characteristics of Photorhabdus khanii subsp. guanajuatensis strain MEX20-17 highlight its potential ecological significance, particularly in terms of its interactions with host organisms and its contribution to soil microbiomes. Understanding these traits can provide insights into the ecological roles of pathogenic bacteria in their native habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus khanii
Strainsubsp. guanajuatensis strain MEX20-17

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus khanii subsp. guanajuatensis strain MEX20-17
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus khanii subsp. guanajuatensis strain MEX20-17

Gene Summary

Adenine Count

1557604 bp

Thymine Count

1555256 bp

Guanine Count

1186644 bp

Cytosine Count

1211659 bp

Genome Length

5512522 bp

Protein-coding Genes

4371 genes

Non-Coding Genes

345 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseC5467_08885Not AvailablePositive1947942 - 194897036134.6
3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabzC5467_08890Not AvailablePositive1949091 - 194954317093.9
acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferaseC5467_08895Not AvailablePositive1949547 - 195033528420.2
lipid-a-disaccharide synthaseC5467_08900Not AvailablePositive1950340 - 195152143652.9
ribonuclease hiiC5467_08905Not AvailablePositive1951518 - 195210821328.2
dna polymerase iii subunit alphaC5467_08910Not AvailablePositive1952166 - 1955648130609.0
acetyl-coa carboxylase carboxyl transferase subunit alphaC5467_08915Not AvailablePositive1955661 - 195662035481.9
trna lysidine(34) synthetase tilsC5467_08920Not AvailablePositive1956834 - 195816251408.0
rho-binding antiterminatorC5467_08925Not AvailableNegative1958197 - 195846310051.0
copper homeostasis/adhesion lipoprotein nlpeC5467_08930Not AvailablePositive1958797 - 195946224329.4

Displaying genes 1891 – 1900 of 4716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.