Labrys okinawensis strain RP1T

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Xanthobacteraceae

Genus

Labrys

Description

Labrys okinawensis strain RP1T is a Gram-negative, non-spore-forming rod-shaped bacterium that exhibits aerobic respiration and thrives optimally at a temperature of 25.0°C. This strain, characterized by its rod-like morphology, is part of a broader group of microbes that display a diverse range of metabolic capabilities, although specific metabolic pathways for strain RP1T have not been detailed in the available data. As a Gram-negative organism, Labrys okinawensis strain RP1T possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical for its classification and may influence its interaction with the environment as well as its susceptibility to certain antibiotics. The aerobic nature of this strain indicates that it relies on oxygen for growth and energy production, positioning it in ecosystems where oxygen is readily available. The optimal growth temperature of 25.0°C suggests that Labrys okinawensis strain RP1T is well-adapted to moderate environmental conditions, potentially making it a candidate for further study in relation to its role in temperate ecosystems. This adaptability may also provide insights into its physiological mechanisms for survival in fluctuating thermal environments, contributing to our understanding of microbial resilience in changing climates.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyXanthobacteraceae
GenusLabrys
SpeciesLabrys okinawensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labrys okinawensis strain RP1T

Accession NumberPUEJ00000000.1

Gene Summary

Adenine Count

1169800 bp

Thymine Count

1170584 bp

Guanine Count

2091351 bp

Cytosine Count

2076605 bp

Genome Length

6508340 bp

Protein-coding Genes

5835 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Trna-metNot AvailableNot Available+50 - 126Not Available
16s ribosomal rnaNot AvailableNot Available+196 - 1685Not Available
hypothetical proteinC5L14_00010Not Available-271 - 104128162.0
carbonic anhydraseC5L14_00015Not Available+1322 - 203824873.0
23s ribosomal rnaNot AvailableNot Available+2460 - 5282Not Available
hypothetical proteinC5L14_00025Not Available+2688 - 6296117339.0
5s ribosomal rnaNot AvailableNot Available+5427 - 5541Not Available
hypothetical proteinC5L14_00030Not Available+7105 - 809135603.1
cellulose synthaseC5L14_00035Not Available-8204 - 1030675736.9
endoglucanaseC5L14_00040Not Available-10600 - 1162837301.5

Displaying genes 1 – 10 of 5891 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites