Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-export chaperone secb | C5L14_04935 | Not Available | Positive | 1091495 - 1091977 | 17391.8 |
| hypothetical protein | C5L14_04940 | Not Available | Positive | 1092566 - 1092895 | 11985.3 |
| dna polymerase iii subunit epsilon | C5L14_04945 | Not Available | Negative | 1093452 - 1094141 | 25224.3 |
| dephospho-coa kinase | C5L14_04950 | Not Available | Negative | 1094277 - 1094867 | 20885.4 |
| shikimate dehydrogenase | C5L14_04955 | Not Available | Negative | 1094959 - 1095792 | 29755.0 |
| hypothetical protein | C5L14_04960 | Not Available | Negative | 1095811 - 1096452 | 22782.5 |
| spermidine/putrescine abc transporter atp-binding protein | C5L14_04965 | Not Available | Positive | 1096661 - 1097809 | 41713.0 |
| abc transporter permease | C5L14_04970 | Not Available | Positive | 1097809 - 1098729 | 33962.4 |
| spermidine/putrescine abc transporter permease potc | C5L14_04975 | Not Available | Positive | 1098722 - 1099522 | 29261.2 |
| putrescine/spermidine abc transporter substrate-binding protein | C5L14_04980 | Not Available | Positive | 1099628 - 1100662 | 38286.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
