Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate synthase | C5L14_04575 | Not Available | Positive | 1019142 - 1020314 | 41224.2 |
| hypothetical protein | C5L14_04580 | Not Available | Negative | 1020374 - 1020613 | 9151.66 |
| nudix hydrolase | C5L14_04585 | Not Available | Positive | 1020872 - 1021306 | 16420.9 |
| eama family transporter | C5L14_04590 | Not Available | Negative | 1021371 - 1022261 | 30947.8 |
| hydrolase | C5L14_04595 | Not Available | Negative | 1022442 - 1023323 | 32209.4 |
| 3-isopropylmalate dehydratase small subunit | C5L14_04600 | Not Available | Negative | 1023340 - 1023951 | 21628.1 |
| 3-isopropylmalate dehydratase large subunit | C5L14_04605 | Not Available | Negative | 1023955 - 1025385 | 50943.9 |
| c4-dicarboxylate transporter dcta | C5L14_04610 | Not Available | Negative | 1025446 - 1026795 | 46832.6 |
| lysr family transcriptional regulator | C5L14_04615 | Not Available | Positive | 1027018 - 1028004 | 35767.6 |
| nmra family transcriptional regulator | C5L14_04620 | Not Available | Negative | 1028229 - 1029098 | 31392.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
