Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | C5L14_04375 | Not Available | Positive | 970837 - 971121 | 10477.8 |
| mannose-1-phosphate guanylyltransferase | C5L14_04380 | Not Available | Negative | 971160 - 971882 | 26194.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | C5L14_04385 | Not Available | Negative | 971879 - 973411 | 56880.0 |
| two-component sensor histidine kinase | C5L14_04390 | Not Available | Negative | 973488 - 975815 | 85102.2 |
| hypothetical protein | C5L14_04395 | Not Available | Negative | 976646 - 976882 | 8295.81 |
| duf1674 domain-containing protein | C5L14_04400 | Not Available | Negative | 977092 - 977298 | 7416.59 |
| potassium transporter | C5L14_04405 | Not Available | Positive | 977744 - 979108 | 53075.5 |
| lysr family transcriptional regulator | C5L14_04410 | Not Available | Negative | 979210 - 980118 | 33093.1 |
| mfs sugar transporter | C5L14_04415 | Not Available | Positive | 980234 - 981415 | 39786.1 |
| aldo/keto reductase | C5L14_04420 | Not Available | Positive | 981446 - 982480 | 37418.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
