Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | C5L14_04325 | Not Available | Positive | 959495 - 960598 | 39110.4 |
| mbl fold metallo-hydrolase | C5L14_04330 | Not Available | Positive | 960641 - 961384 | 27859.0 |
| glycerophosphoryl diester phosphodiesterase | C5L14_04335 | Not Available | Negative | 961389 - 962120 | 26149.3 |
| xre family transcriptional regulator | C5L14_04340 | Not Available | Negative | 962492 - 962722 | 8037.36 |
| acyltransferase | C5L14_04345 | Not Available | Negative | 963183 - 964292 | 40878.5 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | C5L14_04350 | Not Available | Negative | 965063 - 966013 | 35336.9 |
| damage-inducible protein dinb | C5L14_04355 | Not Available | Positive | 966608 - 967105 | 18788.3 |
| dna topoisomerase (atp-hydrolyzing) subunit b | C5L14_04360 | Not Available | Negative | 967207 - 969633 | 88639.2 |
| lysine transporter lyse | C5L14_04365 | Not Available | Negative | 969751 - 970368 | 21286.5 |
| antitoxin of toxin-antitoxin stability system | C5L14_04370 | Not Available | Positive | 970541 - 970840 | 11586.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
