Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | C5L14_04075 | Not Available | Negative | 896643 - 897518 | 33810.1 |
| pyridoxal 4-dehydrogenase | C5L14_04080 | Not Available | Positive | 897875 - 898894 | 36897.3 |
| d-xylose abc transporter atp-binding protein | C5L14_04085 | Not Available | Positive | 898912 - 900453 | 54998.0 |
| abc transporter permease | C5L14_04090 | Not Available | Positive | 900450 - 901436 | 34015.1 |
| atpase | C5L14_04095 | Not Available | Positive | 901681 - 902679 | 35114.6 |
| rhamnose abc transporter substrate-binding protein | C5L14_04100 | Not Available | Positive | 902720 - 903724 | 35390.4 |
| 3-oxoacyl-acp reductase | C5L14_04105 | Not Available | Positive | 903789 - 904541 | 26153.5 |
| galactose 1-dehydrogenase | C5L14_04110 | Not Available | Negative | 904813 - 905754 | 33651.1 |
| arginine--trna ligase | C5L14_04115 | Not Available | Negative | 905840 - 907561 | 61368.8 |
| hypothetical protein | C5L14_04120 | Not Available | Negative | 907800 - 908129 | 12273.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
