Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit beta | C5L14_04025 | Not Available | Negative | 887032 - 887319 | 10686.1 |
| signal peptide peptidase sppa | C5L14_04030 | Not Available | Negative | 887500 - 888456 | 33723.5 |
| transcriptional regulator | C5L14_04035 | Not Available | Negative | 888593 - 889375 | 28990.4 |
| sam-dependent methyltransferase | C5L14_04040 | Not Available | Positive | 889475 - 890242 | 27392.6 |
| gfa family protein | C5L14_04045 | Not Available | Positive | 890691 - 891101 | 15017.5 |
| translational gtpase typa | C5L14_04050 | Not Available | Positive | 891243 - 893066 | 66456.1 |
| ef-p lysine aminoacylase genx | C5L14_04055 | Not Available | Negative | 893409 - 894452 | 39101.2 |
| metal-dependent hydrolase | C5L14_04060 | Not Available | Positive | 894545 - 895279 | 27300.2 |
| l-rhamnose mutarotase | C5L14_04065 | Not Available | Negative | 895449 - 895766 | 12277.7 |
| hypothetical protein | C5L14_04070 | Not Available | Negative | 895825 - 896625 | 28915.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
