Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | C5L14_03525 | Not Available | Positive | 781219 - 781941 | 25016.0 |
| citryl-coa lyase | C5L14_03530 | Not Available | Positive | 781947 - 782729 | 27879.6 |
| maleylacetate reductase | C5L14_03535 | Not Available | Positive | 782726 - 783898 | 40994.7 |
| hypothetical protein | C5L14_03540 | Not Available | Positive | 783819 - 784382 | 20954.9 |
| mbl fold metallo-hydrolase | C5L14_03545 | Not Available | Positive | 784412 - 785314 | 34063.7 |
| mfs transporter | C5L14_03550 | Not Available | Positive | 785434 - 786750 | 46578.8 |
| 2-deoxy-d-gluconate 3-dehydrogenase | C5L14_03555 | Not Available | Positive | 786823 - 787620 | 27445.9 |
| acyl-coa dehydrogenase | C5L14_03560 | Not Available | Positive | 787632 - 788846 | 45174.4 |
| phosphotransferase family protein | C5L14_03565 | Not Available | Positive | 788843 - 789862 | 37831.8 |
| ai-2e family transporter | C5L14_03570 | Not Available | Negative | 790916 - 792061 | 40663.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
