Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | C5L14_03375 | Not Available | Positive | 749429 - 750310 | 32046.2 |
| gfo/idh/moca family oxidoreductase | C5L14_03380 | Not Available | Positive | 750307 - 751302 | 35836.5 |
| hypothetical protein | C5L14_03385 | Not Available | Negative | 751667 - 753607 | 72950.2 |
| carbohydrate abc transporter permease | C5L14_03390 | Not Available | Negative | 753662 - 754525 | 31313.4 |
| sugar abc transporter permease | C5L14_03395 | Not Available | Negative | 754522 - 755442 | 33786.5 |
| abc transporter substrate-binding protein | C5L14_03400 | Not Available | Negative | 755610 - 756854 | 44096.3 |
| laci family transcriptional regulator | C5L14_03405 | Not Available | Negative | 756882 - 757943 | 37412.0 |
| transketolase | C5L14_03410 | Not Available | Positive | 758343 - 759257 | 32335.7 |
| transketolase | C5L14_03415 | Not Available | Positive | 759254 - 760228 | 33819.9 |
| glycerol kinase | C5L14_03420 | Not Available | Positive | 760228 - 761706 | 51749.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
