Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5L14_03225 | Not Available | Positive | 708048 - 709280 | 44491.6 |
| hypothetical protein | C5L14_03230 | Not Available | Negative | 709392 - 711965 | 90959.0 |
| serine/threonine-protein phosphatase | C5L14_03235 | Not Available | Negative | 711974 - 712741 | 27671.8 |
| type vi secretion system-associated protein tagf | C5L14_03240 | Not Available | Negative | 712741 - 713424 | 25498.5 |
| type vi secretion system membrane subunit tssm | C5L14_03245 | Not Available | Negative | 713429 - 716995 | 130258.0 |
| type vi secretion system protein tssl | C5L14_03250 | Not Available | Negative | 716995 - 718458 | 52675.2 |
| type vi secretion system baseplate subunit tssk | C5L14_03255 | Not Available | Negative | 718470 - 719804 | 50100.0 |
| hypothetical protein | C5L14_03260 | Not Available | Positive | 720159 - 720554 | 14790.4 |
| hypothetical protein | C5L14_03265 | Not Available | Positive | 720574 - 723012 | 84489.1 |
| type vi secretion system-associated fha domain protein tagh | C5L14_03270 | Not Available | Negative | 724148 - 725479 | 48061.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
