Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system atpase tssh | C5L14_03175 | Not Available | Negative | 695750 - 698383 | 94822.9 |
| type vi secretion system baseplate subunit tssg | C5L14_03180 | Not Available | Negative | 698389 - 699519 | 42061.1 |
| type vi secretion system baseplate subunit tssf | C5L14_03185 | Not Available | Negative | 699516 - 701480 | 72815.2 |
| hypothetical protein | C5L14_03190 | Not Available | Negative | 701485 - 702342 | 30929.1 |
| type vi secretion system tube protein hcp | C5L14_03195 | Not Available | Negative | 702239 - 702727 | 17234.9 |
| type vi secretion system contractile sheath large subunit | C5L14_03200 | Not Available | Negative | 702847 - 704340 | 56042.2 |
| type vi secretion system contractile sheath small subunit | C5L14_03205 | Not Available | Negative | 704395 - 704916 | 19620.8 |
| dna-binding response regulator | C5L14_03210 | Not Available | Negative | 705528 - 706214 | 24877.1 |
| hypothetical protein | C5L14_03215 | Not Available | Positive | 706486 - 707400 | 33076.5 |
| type vi secretion protein | C5L14_03220 | Not Available | Positive | 707575 - 707865 | 9673.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
