Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | C5L14_02825 | Not Available | Positive | 612788 - 614773 | 71971.8 |
| aspartyl/asparaginyl beta-hydroxylase | C5L14_02830 | Not Available | Positive | 615030 - 615866 | 32042.6 |
| muconate cycloisomerase | C5L14_02835 | Not Available | Negative | 615921 - 617045 | 40965.5 |
| esterase | C5L14_02840 | Not Available | Negative | 617097 - 618038 | 33686.6 |
| glycine/betaine abc transporter substrate-binding protein | C5L14_02845 | Not Available | Negative | 618174 - 619070 | 32027.7 |
| glycine/betaine abc transporter substrate-binding protein | C5L14_02850 | Not Available | Negative | 619158 - 620057 | 32190.8 |
| abc transporter permease | C5L14_02855 | Not Available | Negative | 620095 - 620784 | 24651.2 |
| abc transporter atp-binding protein | C5L14_02860 | Not Available | Negative | 620856 - 621974 | 40459.2 |
| choline abc transporter permease | C5L14_02865 | Not Available | Negative | 621971 - 622633 | 22674.6 |
| isochorismatase | C5L14_02870 | Not Available | Negative | 622692 - 623372 | 24345.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
