Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | C5L14_02620 | Not Available | Negative | 565966 - 567267 | 47153.8 |
| duf3313 domain-containing protein | C5L14_02625 | Not Available | Negative | 567496 - 568353 | 30009.4 |
| tetr family transcriptional regulator | C5L14_02630 | Not Available | Positive | 568528 - 569133 | 22304.1 |
| rna-binding transcriptional accessory protein | C5L14_02635 | Not Available | Positive | 569306 - 571630 | 83403.0 |
| lysr family transcriptional regulator | C5L14_02640 | Not Available | Negative | 571678 - 572583 | 32846.6 |
| glycine cleavage system protein t | C5L14_02645 | Not Available | Positive | 572786 - 573943 | 40620.9 |
| glycine cleavage system protein h | C5L14_02650 | Not Available | Positive | 573954 - 574316 | 12570.7 |
| glycine dehydrogenase (aminomethyl-transferring) | C5L14_02655 | Not Available | Positive | 574427 - 577273 | 102326.0 |
| l-serine ammonia-lyase | C5L14_02660 | Not Available | Positive | 577338 - 578744 | 49442.4 |
| tautomerase family protein | C5L14_02665 | Not Available | Negative | 578861 - 579241 | 14389.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
