Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | C5L14_02305 | Not Available | Negative | 493051 - 493734 | 25155.5 |
| sugar abc transporter substrate-binding protein | C5L14_02310 | Not Available | Positive | 493923 - 495047 | 39299.6 |
| sugar abc transporter atp-binding protein | C5L14_02315 | Not Available | Positive | 495346 - 496896 | 55893.6 |
| abc transporter permease | C5L14_02320 | Not Available | Positive | 496914 - 498953 | 70424.4 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | C5L14_02325 | Not Available | Positive | 498979 - 499758 | 27000.6 |
| 3-hydroxyacyl-coa dehydrogenase | C5L14_02330 | Not Available | Positive | 499788 - 500732 | 34699.9 |
| 3-keto-5-aminohexanoate cleavage protein | C5L14_02335 | Not Available | Positive | 500742 - 501668 | 33519.2 |
| calcium-binding protein | C5L14_02340 | Not Available | Positive | 501733 - 502611 | 31834.6 |
| hypothetical protein | C5L14_02345 | Not Available | Negative | 503054 - 503473 | 14908.0 |
| helix-turn-helix transcriptional regulator | C5L14_02350 | Not Available | Positive | 503867 - 504625 | 27435.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
